CLUSTAL 2.0.10 Multiple Sequence Alignments


Sequence format is Pearson
Sequence 1: 1type1      1119 aa
Sequence 2: 2type2      1091 aa
Sequence 3: 3type3      1144 aa
Sequence 4: 4type4      1077 aa
Sequence 5: 5type5      1261 aa
Sequence 6: 6type6      1168 aa
Sequence 7: 7type7      1080 aa
Sequence 8: 8type8      1251 aa
Sequence 9: 9type9      1353 aa
Sequence 10: 10type10    1610 aa

 comparing  
paramArg[setSeqNoRange]= off
 comparing 
 Start of Pairwise alignments
Aligning...

Sequences (1:2) Aligned. Score:  33
Sequences (1:3) Aligned. Score:  31
Sequences (1:4) Aligned. Score:  34
Sequences (1:5) Aligned. Score:  39
Sequences (1:6) Aligned. Score:  39
Sequences (1:7) Aligned. Score:  34
Sequences (1:8) Aligned. Score:  34
Sequences (1:9) Aligned. Score:  26
Sequences (1:10) Aligned. Score:  9
Sequences (2:3) Aligned. Score:  32
Sequences (2:4) Aligned. Score:  55
Sequences (2:5) Aligned. Score:  36
Sequences (2:6) Aligned. Score:  35
Sequences (2:7) Aligned. Score:  53
Sequences (2:8) Aligned. Score:  34
Sequences (2:9) Aligned. Score:  26
Sequences (2:10) Aligned. Score:  7
Sequences (3:4) Aligned. Score:  31
Sequences (3:5) Aligned. Score:  33
Sequences (3:6) Aligned. Score:  32
Sequences (3:7) Aligned. Score:  33
Sequences (3:8) Aligned. Score:  33
Sequences (3:9) Aligned. Score:  26
Sequences (3:10) Aligned. Score:  7
Sequences (4:5) Aligned. Score:  35
Sequences (4:6) Aligned. Score:  37
Sequences (4:7) Aligned. Score:  51
Sequences (4:8) Aligned. Score:  34
Sequences (4:9) Aligned. Score:  27
Sequences (4:10) Aligned. Score:  9
Sequences (5:6) Aligned. Score:  66
Sequences (5:7) Aligned. Score:  36
Sequences (5:8) Aligned. Score:  36
Sequences (5:9) Aligned. Score:  23
Sequences (5:10) Aligned. Score:  5
Sequences (6:7) Aligned. Score:  36
Sequences (6:8) Aligned. Score:  36
Sequences (6:9) Aligned. Score:  25
Sequences (6:10) Aligned. Score:  7
Sequences (7:8) Aligned. Score:  33
Sequences (7:9) Aligned. Score:  25
Sequences (7:10) Aligned. Score:  8
Sequences (8:9) Aligned. Score:  22
Sequences (8:10) Aligned. Score:  6
Sequences (9:10) Aligned. Score:  7
Guide tree file created:   [/ebi/extserv/clustalw-work/interactive/2009032816/clustalw2-20090328-1621532291.dnd]

There are 9 groups
Start of Multiple Alignment

Aligning...
Group 1: Sequences:   2      Score:18274
Group 2: Sequences:   3      Score:17439
Group 3: Sequences:   2      Score:21083
Group 4: Sequences:   3      Score:15279
Group 5: Sequences:   4      Score:15665
Group 6: Sequences:   7      Score:11048
Group 7: Sequences:   8      Score:11663
Group 8:                     Delayed
Group 9:                     Delayed
Alignment Score 61469

CLUSTAL-Alignment file created  [/ebi/extserv/clustalw-work/interactive/2009032816/clustalw2-20090328-1621532291.aln]