Table S4.4. Fragment 4 interactions with His

Fragment 4
Listed below are the ligands in the PDB that contain the chemical fragment shown on the left and which interact via this fragment with the side chain of a His residue via hydrogen bonds.

The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.

Ligand Description


  1. Ligand: TDP
Thiamin diphosphate
PDB codes: 1w85, 2bfe.


  2. Ligand: THW
C2-1-hydroxyphenyl-thiamin diphosphate
PDB code: 2bew.


  3. Ligand: TPP
Thiamine diphosphate
PDB codes: 1ni4, 2ozl, 3exe.


  4. Ligand: 624
2-(2-(3,4-dichlorophenyl)-5-(isopropylamino)-6-oxopyrimidin-1(6h)-yl)-n-((s)-1-oxo-1-(thiazol-2-yl)-
5-guanidinopentan-2-yl)acetamide
PDB code: 1zsl.


  5. Ligand: 632
2-(5-benzylamino-2-methylsulfanyl-6-oxo-6h-pyrimidin-1-yl)-n-[4-guanidino-1-(thiazole-2-carbonyl)-
butyl]-acetamide
PDB code: 1ztj.


  6. Ligand: 682
N~2~-(aminocarbonyl)-n~1~-{4-{[amino(imino)methyl]amino}-1-[hydroxy(1,3-thiazol-2-
yl)methyl]butyl}valinamide
PDB code: 2fda.


  7. Ligand: 995
4-methyl-pentanoic acid {1-[4-guanidino-1-(thiazole-2-carbonyl)-butylcarbamoyl]-2-methyl-propyl}-
amide
PDB code: 1zpb.