Table S1.3. Fragment 3 interactions with Asp

Fragment 3
Listed below are the ligands in the PDB that contain the chemical fragment shown on the left and which interact via this fragment with the side chain of a Asp residue via hydrogen bonds.

The PDB codes are hyperlinked to a schematic LIGPLOT diagram in PDBsum.

Ligand Description


  1. Ligand: 124
2-(2-hydroxy-phenyl)-1h-indole-5-carboxamidine
PDB code: 1gi6.


  2. Ligand: 132
6-chloro-2-(2-hydroxy-biphenyl-3-yl)-1h-indole-5-carboxamidine
PDB codes: 1gj4, 1gj6, 1gj7, 1o5e.


  3. Ligand: 23M
2-(3-methylphenyl)-1h-indole-5-carboximidamide
PDB code: 2g5n.


  4. Ligand: 678
(3-{5-[amino(iminio)methyl]-1h-indol-2-yl}-5-bromo-4-oxidophenyl)acetate
PDB code: 1o3l.


  5. Ligand: 696
3-{5-[amino(iminio)methyl]-1h-indol-2-yl}-1,1'-biphenyl-2-olate
PDB codes: 1o2g, 1o3e, 1o3f, 1o3g.


  6. Ligand: 783
3-{5-[amino(iminio)methyl]-1h-indol-2-yl}-5-methoxy-1,1'-biphenyl-2-olate
PDB code: 1o2t.


  7. Ligand: 907
2-{5-[amino(iminio)methyl]-1h-indol-2-yl}-6-bromo-4-methylbenzenolate
PDB codes: 1o3h, 1o3i.


  8. Ligand: 991
2-{5-[amino(iminio)methyl]-6-chloro-1h-indol-2-yl}-6-(cyclopentyloxy)benzenolate
PDB code: 1o2q.


  9. Ligand: CR3
2-{5-[amino(iminio)methyl]-1h-indol-2-yl}-6-(cyclopentyloxy)benzenolate
PDB code: 1o2h.


  10. Ligand: MI2
2-(2-methylphenyl)-1h-indole-5-carboximidamide
PDB code: 2g8t.


  11. Ligand: 134
6-fluoro-2-[2-hydroxy-3-(2-methyl-cyclohexyloxy)-phenyl]-1h-indole-5-carboxamidine
PDB code: 1gj9.